"" " for modeling languages.for details."" " import refrom pygments.lexer import RegexLexer, include, bygroups, using, defaultfrom pygments.token import Text, Comment, Operator, Keyword, Name, String, \from pygments.lexers.html import HtmlLexerfrom pygments.lexers import _stan_builtins'ModelicaLexer' , 'BugsLexer' , 'JagsLexer' , 'StanLexer' ]class ModelicaLexer(RegexLexer):"" " For Modelica source code."" " 'Modelica' 'http://www.modelica.org/ ' 'modelica' ]'*.mo' ]'text/x-modelica' ]'1.1' "(?:'(?:[^\\']|\\.)+'|[a-zA-Z_]\w*)" 'whitespace' : ['[\s\ufeff]+' , Text),'//[^\n]*\n?' , Comment.Single),'/\*.*?\*/' , Comment.Multiline)'root' : ['whitespace' ),'"' , String.Double, 'string' ),'[()\[\]{},;]+' , Punctuation),'\.?[*^/+-]|\.|<>|[<>:=]=?' , Operator),'\d+(\.?\d*[eE][-+]?\d+|\.\d*)' , Number.Float),'\d+' , Number.Integer),'(abs|acos|actualStream|array|asin|assert|AssertionLevel|atan|' 'atan2|backSample|Boolean|cardinality|cat|ceil|change|Clock|' 'Connections|cos|cosh|cross|delay|diagonal|div|edge|exp|' 'ExternalObject|fill|floor|getInstanceName|hold|homotopy|' 'identity|inStream|integer|Integer|interval|inverse|isPresent|' 'linspace|log|log10|matrix|max|min|mod|ndims|noClock|noEvent|' 'ones|outerProduct|pre|previous|product|Real|reinit|rem|rooted|' 'sample|scalar|semiLinear|shiftSample|sign|sin|sinh|size|skew|' 'smooth|spatialDistribution|sqrt|StateSelect|String|subSample|' 'sum|superSample|symmetric|tan|tanh|terminal|terminate|time|' 'transpose|vector|zeros)\b' , Name.Builtin),'(algorithm|annotation|break|connect|constant|constrainedby|der|' 'discrete|each|else|elseif|elsewhen|encapsulated|enumeration|' 'equation|exit|expandable|extends|external|firstTick|final|flow|for|if|' 'import|impure|in|initial|inner|input|interval|loop|nondiscrete|outer|' 'output|parameter|partial|protected|public|pure|redeclare|' 'replaceable|return|stream|then|when|while)\b' ,'(and|not|or)\b' , Operator.Word),'(block|class|connector|end|function|model|operator|package|' 'record|type)\b' , Keyword.Reserved, 'class' ),'(false|true)\b' , Keyword.Constant),'within\b' , Keyword.Reserved, 'package-prefix' ),'class' : ['whitespace' ),'(function|record)\b' , Keyword.Reserved),'(if|for|when|while)\b' , Keyword.Reserved, '#pop'), Class , '#pop'), '#pop') 'package-prefix' : ['whitespace' ),'#pop'), '#pop') 'string' : ['"' , String.Double, '#pop'), '\\[\' "?\\abfnrtv]', String.Escape), '(?i)<\s*html\s*>([^\\"]|\\.)+?(<\s*/\s*html\s*>|(?="))' ,'<|\\?[^"\\<]+' , String.Double)class BugsLexer(RegexLexer):"" " for OpenBugs and WinBugs"" " 'BUGS' 'bugs' , 'winbugs' , 'openbugs' ]'*.bug' ]'https://www.mrc-bsu.cam.ac.uk/software/bugs/openbugs ' '1.6' # Scalar functions 'abs' , 'arccos' , 'arccosh' , 'arcsin' , 'arcsinh' , 'arctan' , 'arctanh' ,'cloglog' , 'cos' , 'cosh' , 'cumulative' , 'cut' , 'density' , 'deviance' ,'equals' , 'expr' , 'gammap' , 'ilogit' , 'icloglog' , 'integral' , 'log' ,'logfact' , 'loggam' , 'logit' , 'max' , 'min' , 'phi' , 'post.p.value' ,'pow' , 'prior.p.value' , 'probit' , 'replicate.post' , 'replicate.prior' ,'round' , 'sin' , 'sinh' , 'solution' , 'sqrt' , 'step' , 'tan' , 'tanh' ,'trunc' ,# Vector functions 'inprod' , 'interp.lin' , 'inverse' , 'logdet' , 'mean' , 'eigen.vals' ,'ode' , 'prod' , 'p.valueM' , 'rank' , 'ranked' , 'replicate.postM' ,'sd' , 'sort' , 'sum' ,# Special 'D' , 'I' , 'F' , 'T' , 'C' )"" " OpenBUGS built-in functions From http://www.openbugs.info/Manuals/ModelSpecification.html #ContentsAII and censoring.and ``C`` are in OpenBUGS. ``I`` in WinBUGS.http://www.openbugs.info/Examples/Functionals.html "" " 'dbern' , 'dbin' , 'dcat' , 'dnegbin' , 'dpois' ,'dhyper' , 'dbeta' , 'dchisqr' , 'ddexp' , 'dexp' ,'dflat' , 'dgamma' , 'dgev' , 'df' , 'dggamma' , 'dgpar' ,'dloglik' , 'dlnorm' , 'dlogis' , 'dnorm' , 'dpar' ,'dt' , 'dunif' , 'dweib' , 'dmulti' , 'ddirch' , 'dmnorm' ,'dmt' , 'dwish' )"" " OpenBUGS built-in distributions from http://www.openbugs.info/Manuals/ModelSpecification.html #ContentsAI "" " 'whitespace' : ["\s+" , Text),'comments' : [# Comments '#.*$', Comment.Single), 'root' : [# Comments 'comments' ),'whitespace' ),# Block start '(model)(\s+)(\{)' ,# Reserved Words '(for|in)(?![\w.])' , Keyword.Reserved),# Built-in Functions '({})(?=\s*\()' .format(r'|' .join(_FUNCTIONS + _DISTRIBUTIONS)),# Regular variable names '[A-Za-z][\w.]*' , Name),# Number Literals '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)?' , Number),# Punctuation '\[|\]|\(|\)|:|,|;' , Punctuation),# Assignment operators # SLexer makes these tokens Operators. '<-|~' , Operator),# Infix and prefix operators '\+|-|\*|/' , Operator),# Block '[{}]' , Punctuation),def analyse_text(text):if re.search(r"^\s*model\s*{" , text, re.M):return 0.7else :return 0.0class JagsLexer(RegexLexer):"" " for JAGS."" " 'JAGS' 'jags' ]'*.jag' , '*.bug' ]'https://mcmc-jags.sourceforge.io ' '1.6' # JAGS 'abs' , 'arccos' , 'arccosh' , 'arcsin' , 'arcsinh' , 'arctan' , 'arctanh' ,'cos' , 'cosh' , 'cloglog' ,'equals' , 'exp' , 'icloglog' , 'ifelse' , 'ilogit' , 'log' , 'logfact' ,'loggam' , 'logit' , 'phi' , 'pow' , 'probit' , 'round' , 'sin' , 'sinh' ,'sqrt' , 'step' , 'tan' , 'tanh' , 'trunc' , 'inprod' , 'interp.lin' ,'logdet' , 'max' , 'mean' , 'min' , 'prod' , 'sum' , 'sd' , 'inverse' ,'rank' , 'sort' , 't' , 'acos' , 'acosh' , 'asin' , 'asinh' , 'atan' ,# Truncation/Censoring (should I include) 'T' , 'I' )# Distributions with density, probability and quartile functions '[dpq]{x}' for x in 'bern' , 'beta' , 'dchiqsqr' , 'ddexp' , 'dexp' ,'df' , 'gamma' , 'gen.gamma' , 'logis' , 'lnorm' ,'negbin' , 'nchisqr' , 'norm' , 'par' , 'pois' , 'weib' ))# Other distributions without density and probability 'dt' , 'dunif' , 'dbetabin' , 'dbern' , 'dbin' , 'dcat' , 'dhyper' ,'ddirch' , 'dmnorm' , 'dwish' , 'dmt' , 'dmulti' , 'dbinom' , 'dchisq' ,'dnbinom' , 'dweibull' , 'ddirich' )'whitespace' : ["\s+" , Text),'names' : [# Regular variable names '[a-zA-Z][\w.]*\b' , Name),'comments' : [# do not use stateful comments '(?s)/\*.*?\*/' , Comment.Multiline),# Comments '#.*$', Comment.Single), 'root' : [# Comments 'comments' ),'whitespace' ),# Block start '(model|data)(\s+)(\{)' ,'var(?![\w.])' , Keyword.Declaration),# Reserved Words '(for|in)(?![\w.])' , Keyword.Reserved),# Builtins # Need to use lookahead because . is a valid char '({})(?=\s*\()' .format(r'|' .join(_FUNCTIONS# Names 'names' ),# Number Literals '[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)?' , Number),'\[|\]|\(|\)|:|,|;' , Punctuation),# Assignment operators '<-|~' , Operator),# # JAGS includes many more than OpenBUGS '\+|-|\*|\/|\|\|[&]{2}|[<>=]=?|\^|%.*?%' , Operator),'[{}]' , Punctuation),def analyse_text(text):if re.search(r'^\s*model\s*\{' , text, re.M):if re.search(r'^\s*data\s*\{' , text, re.M):return 0.9elif re.search(r'^\s*var' , text, re.M):return 0.9else :return 0.3else :return 0class StanLexer(RegexLexer):"" "Pygments Lexer for Stan models. is specified in the *Stan Modeling Language's Guide and Reference Manual, v2.17.0*, https://github.com/stan-dev/stan/releases/download/v2.17.0/stan-reference-2.17.0.pdf >`__."" " 'Stan' 'stan' ]'*.stan' ]'https://mc-stan.org ' '1.6' 'whitespace' : ["\s+" , Text),'comments' : ['(?s)/\*.*?\*/' , Comment.Multiline),# Comments '(//|#).*$', Comment.Single), 'root' : ['"[^"]*"' , String),# Comments 'comments' ),# block start 'whitespace' ),# Block start '({})(\s*)(\{{)' .format(r'|' .join(('functions' , 'data' , r'transformed\s+?data' ,'parameters' , r'transformed\s+parameters' ,'model' , r'generated\s+quantities' ))),# target keyword 'target\s*\+=' , Keyword),# Reserved Words '({})\b' .format(r'|' .join(_stan_builtins.KEYWORDS)), Keyword),# Truncation 'T(?=\s*\[)' , Keyword),# Data types '({})\b' .format(r'|' .join(_stan_builtins.TYPES)), Keyword.Type),# < should be punctuation, but elsewhere I can't tell if it is in # a range constraint '(<)(\s*)(upper|lower|offset|multiplier)(\s*)(=)' ,'(,)(\s*)(upper)(\s*)(=)' ,# Punctuation "[;,\[\]()]" , Punctuation),# Builtin '({})(?=\s*\()' .format('|' .join(_stan_builtins.FUNCTIONS)), Name.Builtin),'(~)(\s*)({})(?=\s*\()' .format('|' .join(_stan_builtins.DISTRIBUTIONS)),# Special names ending in __, like lp__ '[A-Za-z]\w*__\b' , Name.Builtin.Pseudo),'({})\b' .format(r'|' .join(_stan_builtins.RESERVED)), Keyword.Reserved),# user-defined functions '[A-Za-z]\w*(?=\s*\()]' , Name.Function),# Imaginary Literals '[0-9]+(\.[0-9]*)?([eE][+-]?[0-9]+)?i' , Number.Float),'\.[0-9]+([eE][+-]?[0-9]+)?i' , Number.Float),'[0-9]+i' , Number.Float),# Real Literals '[0-9]+(\.[0-9]*)?([eE][+-]?[0-9]+)?' , Number.Float),'\.[0-9]+([eE][+-]?[0-9]+)?' , Number.Float),# Integer Literals '[0-9]+' , Number.Integer),# Regular variable names '[A-Za-z]\w*\b' , Name),# Assignment operators '<-|(?:\+|-|\.?/|\.?\*|=)?=|~' , Operator),# Infix, prefix and postfix operators (and = ) "\+|-|\.?\*|\.?/|\\|'|\.?\^|!=?|<=?|>=?|\|\||&&|%|\?|:|%/%|!" , Operator),# Block delimiters '[{}]' , Punctuation),# Distribution | '\|' , Punctuation)def analyse_text(text):if re.search(r'^\s*parameters\s*\{' , text, re.M):return 1.0else :return 0.0quality 71%
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